argument	values
header	None
format	json;tab;table;text;tsv
license	academic;commercial;for_profit;forprofit;ignore;non_profit;nonprofit
password	None
limit	None
datasets	collectri;dorothea;kinaseextra;ligrecextra;lncrna_mrna;mirnatarget;omnipath;pathwayextra;small_molecule;tf_mirna;tf_target;tfregulons
types	lncrna_post_transcriptional;mirna_transcriptional;post_transcriptional;post_translational;small_molecule_protein;transcriptional
sources	None
resources	None
databases	ABS;ACSN;ACSN_SignaLink3;ARACNe-GTEx_DoRothEA;ARN;Adhesome;AlzPathway;BEL-Large-Corpus_ProtMapper;Baccin2019;BioGRID;CA1;CancerCellMap;CancerDrugsDB;CellCall;CellChatDB;CellChatDB-cofactors;CellPhoneDB;CellPhoneDB_Cellinker;CellTalkDB;Cellinker;CollecTRI;Cui2007;CytReg_CollecTRI;DEPOD;DIP;DLRP_Cellinker;DLRP_talklr;DOMINO;DeathDomain;DoRothEA;DoRothEA-A_CollecTRI;DoRothEA-reviews_DoRothEA;ELM;EMBRACE;ENCODE-distal;ENCODE-proximal;ENCODE_tf-mirna;ExTRI_CollecTRI;FANTOM4_DoRothEA;Fantom5_LRdb;GEREDB_CollecTRI;GOA_CollecTRI;Guide2Pharma;Guide2Pharma_Cellinker;Guide2Pharma_LRdb;Guide2Pharma_talklr;HOCOMOCO_DoRothEA;HPMR;HPMR_Cellinker;HPMR_LRdb;HPMR_talklr;HPRD;HPRD-phos;HPRD_KEA;HPRD_LRdb;HPRD_MIMP;HPRD_talklr;HTRI_CollecTRI;HTRIdb;HTRIdb_DoRothEA;HuRI;ICELLNET;InnateDB;InnateDB_SignaLink3;IntAct;IntAct_CollecTRI;IntAct_DoRothEA;JASPAR_DoRothEA;KEA;KEGG;KEGG-MEDICUS;KEGG_DoRothEA;Kinexus_KEA;Kirouac2010;LRdb;Li2012;Lit-BM-17;LncRNADisease;MIMP;MPPI;Macrophage;MatrixDB;NCI-PID_ProtMapper;NFIRegulomeDB_DoRothEA;NRF2ome;NTNU.Curated_CollecTRI;NetPath;NetworKIN_KEA;ORegAnno;ORegAnno_DoRothEA;PAZAR_DoRothEA;PDZBase;Pavlidis2021_CollecTRI;PhosphoNetworks;PhosphoPoint;PhosphoSite;PhosphoSite_KEA;PhosphoSite_MIMP;PhosphoSite_ProtMapper;PhosphoSite_noref;ProtMapper;REACH_ProtMapper;RLIMS-P_ProtMapper;Ramilowski2015;Ramilowski2015_Baccin2019;ReMap_DoRothEA;Reactome_LRdb;Reactome_ProtMapper;Reactome_SignaLink3;RegNetwork_DoRothEA;SIGNOR;SIGNOR_CollecTRI;SIGNOR_ProtMapper;SPIKE;SPIKE_LC;STRING_talklr;SignaLink3;Sparser_ProtMapper;TCRcuration_SignaLink3;TFactS_CollecTRI;TFactS_DoRothEA;TFe_DoRothEA;TRED_DoRothEA;TRIP;TRRD_DoRothEA;TRRUST_CollecTRI;TRRUST_DoRothEA;TransmiR;UniProt_LRdb;Wang;Wojtowicz2020;cellsignal.com_LRdb;connectomeDB2020;dbPTM;iPTMnet;iTALK;miR2Disease;miRDeathDB;miRTarBase;miRecords;ncRDeathDB;phosphoELM;phosphoELM_KEA;phosphoELM_MIMP;scConnect;talklr
targets	None
partners	None
genesymbols	0;1;false;no;true;yes
evidences	None
extra_attrs	None
fields	curation_effort;databases;datasets;dorothea_chipseq;dorothea_coexp;dorothea_curated;dorothea_level;dorothea_tfbs;entity_type;evidences;extra_attrs;ncbi_tax_id;organism;references;resources;sources;tfregulons_chipseq;tfregulons_coexp;tfregulons_curated;tfregulons_level;tfregulons_tfbs;type
tfregulons_levels	A;B;C;D;E
tfregulons_methods	chipseq;coexp;curated;tfbs
dorothea_levels	A;B;C;D;E
dorothea_methods	chipseq;coexp;curated;tfbs
organisms	10090;10116;9606
source_target	AND;OR;and;or
directed	0;1;false;no;true;yes
signed	0;1;false;no;true;yes
loops	0;1;false;no;true;yes
entity_types	complex;drug;lipid;lncrna;metabolite;mirna;protein;small_molecule